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Thursday, September 30, 2021

09-29-2021-2233 - conserved sequences

 In evolutionary biology, conserved sequences are identical or similar sequences in nucleic acids (DNA and RNA) or proteins across species (orthologous sequences), or within a genome (paralogous sequences), or between donor and receptor taxa (xenologous sequences). Conservation indicates that a sequence has been maintained by natural selection.

A highly conserved sequence is one that has remained relatively unchanged far back up the phylogenetic tree, and hence far back in geological time. Examples of highly conserved sequences include the RNA components of ribosomes present in all domains of life, the homeobox sequences widespread amongst Eukaryotes, and the tmRNAin Bacteria. The study of sequence conservation overlaps with the fields of genomicsproteomicsevolutionary biologyphylogeneticsbioinformatics and mathematics.


A multiple sequence alignment of five mammalian histone H1 proteins 
Sequences are the amino acids for residues 120-180 of the proteins. Residues that are conserved across all sequences are highlighted in grey. Below each site (i.e., position) of the protein sequence alignment is a key denoting conserved sites (*), sites with conservative replacements (:), sites with semi-conservative replacements (.), and sites with non-conservative replacements ( ).[1]


https://en.wikipedia.org/wiki/Conserved_sequence

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