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Thursday, August 26, 2021

08-26-2021-1404 - Firmicutes

The Firmicutes (Latinfirmus, strong, and cutis, skin, referring to the cell wall) are a phylum of bacteria, most of which have gram-positive cell wall structure.[3] A few, however, such as MegasphaeraPectinatusSelenomonas and Zymophilus, have a porous pseudo-outer membrane that causes them to stain gram-negative. Scientists once classified the Firmicutes to include all gram-positive bacteria, but have recently defined them to be of a core group of related forms called the low-G+C group, in contrast to the Actinobacteria. They have round cells, called cocci (singular coccus), or rod-like forms (bacillus).

Many Firmicutes produce endospores, which are resistant to desiccation and can survive extreme conditions. They are found in various environments, and the group includes some notable pathogens. Those in one family, the heliobacteria, produce energy through anoxygenic photosynthesis. Firmicutes play an important role in beer, wine, and cider spoilage. 

A phylogeny by Annotree[6] and GTDB release 05-RS95 (17 July 2020).[7]

Firmicutes
Firmicutes G

Limnochordia

Firmicutes E

"Thermaerobacteria"

"Symbiobacteriia"

"Sulfobacillia"

"Selenobacteria"

Negativicutes

Firmicutes B

"Syntrophomonadia"

"Dehalobacteriia"

"Peptococcia"

"Desulfitobacteriia"

"Moorellia"

"Thermincolia"

"Desulfotomaculia"

"Halanaerobiaeota"

"Halanaerobiia"

Firmicutes A

"Thermosediminibacteria"

"Thermoanaerobacteria"

"Mahellia"

Clostridiia s.s.

Firmicutes D

"Proteinivoracia"

"Dethiobacteria"

"Natranaerobiia"

"Fusobacteriota"

Fusobacteria

"Bacillota"

"Alicyclobacillia"

"Desulfuribacillia"

"Bacillia" s.s.

This second phylogeny is based on 16S rRNA-based LTP release 132 by the All-Species Living Tree Project,[8] with the currently accepted taxonomy based on the List of Prokaryotic names with Standing in Nomenclature (LPSN),[9] National Center for Biotechnology Information (NCBI),[10] and some non-validated clade names from Genome Taxonomy Database.[11]

https://en.wikipedia.org/wiki/Firmicutes


above. led zeppelin - black dog


"Thermaerobacteria"

Thermaerobacter {"Thermaerobacterales": "Thermaerobacteraceae"}

"Thermoanaerobacteria"

Caldicellulosiruptor {"Caldicellulosiruptorales": "Caldicellulosiruptoraceae"}

"Thermovenabulales"

Dictyoglomus {Dictyoglomaceae}

Tepidanaerobacter {"Tepidanaerobacteraceae"}

"Thermovenabulaceae"

"Ammonificaceae" {"Ammonifexales"}

Thermoanaerobacteraceae {Thermoanaerobacterales}

"Moorellaceae" {"Moorellales"}

"Thermacetogeniaceae" {"Thermacetogeniales"}

Carboxydothermus {"Carboxydothermales": "Carboxydothermaceae"}

"Symbiobacteriia"

Gelria

Symbiobacterium {"Symbiobacteriales": Symbiobacteriaceae}

Sulfobacillus {"Sulfobacillales": "Sulfobacillaceae"}

Clostridia s.s.

Bacillia

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